DMR 10881 chr1:154387551-154387700 (150bp)

DMR Stats
Positionchr1:154387551-154387700 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesIL6R (0bp away)
ANODEV p-value0.0498788791484
FrequenciesBenign: 1.0 (14.29%), Low: 0.0 (0.0%), High: 2.0 (22.22 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
10881 IL6R 1785 uc001fez.2 chr1 154377669 154441926 + 150 100.0 0.04 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0) 0.0
10881 IL6R 1785 uc001ffa.2 chr1 154377669 154441926 + 150 100.0 0.05 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0) 0.0
10881 IL6R 1785 uc021paf.1 chr1 154377669 154410561 + 150 100.0 0.04 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0) 0.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
10881 chr1 154387386 154387675 wgEncodeRegDnaseClusteredV2 3 score:256, srow:72110
10881 chr1 154387338 154387629 phastConsElements100way lod=1189 score:694, srow:544832
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
10881 cellmeth_recounts PrEC: 3, LNCaP: 1, DU145: 0
10881 cellexp id=ENSG00000160712, name=IL6R, PrEC=2369, str=2257, LNCaP=1570, str=3073, DU145=2560, str=2301
10881 cellexp id=ENSG00000228264, name=RP11-350G8.7, PrEC=3, str=4, LNCaP=6, str=8, DU145=7, str=6
10881 tcgaexp gene=IL6R, entrez=3570, pos=chr1:154377669-154441926(+), B=702, L=429, M=533, H=499
10881 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305