DMR 11335 chr1:248036201-248036400 (200bp)

DMR Stats
Positionchr1:248036201-248036400 (View on UCSC)
Width200bp
Genomic Contextintron
Nearest GenesTRIM58 (0bp away)
ANODEV p-value0.0399330587748
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 3.0 (33.33 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
11335 TRIM58 2830 uc001ido.3 chr1 248020501 248043438 + 200 100.0 0.18 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (100), E6 (0) 0.0
11335 TRIM58 2831 uc001idp.1 chr1 248031265 248060142 + 200 100.0 0.26 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields

Omics Overlaps

Dmrid Omic Set Data Plot
11335 cellmeth_recounts PrEC: 0, LNCaP: 3, DU145: 3
11335 cellexp id=ENSG00000162722, name=TRIM58, PrEC=1, str=4, LNCaP=1, str=0, DU145=0, str=0
11335 cellexp id=ENSG00000238243, name=OR2W3, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0
11335 tcgaexp gene=TRIM58, entrez=25893, pos=chr1:248020501-248060142(+), B=191, L=318, M=354, H=389