DMR 11338 chr1:249139301-249139450 (150bp)

DMR Stats
Positionchr1:249139301-249139450 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesZNF672 (0bp away)
ANODEV p-value0.0127853337374
FrequenciesBenign: 2.0 (28.57%), Low: 0.0 (0.0%), High: 5.0 (55.56 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
11338 ZNF672 2867 uc001iex.3 chr1 249132530 249143714 + 150 100.0 0.14 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
11338 chr1 249137564 249139563 cpgShelf — values(x.gr)[overs$srow, ]:3953
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
11338 cellmeth_recounts PrEC: 4, LNCaP: 14, DU145: 4
11338 cellexp id=ENSG00000171161, name=ZNF672, PrEC=2094, str=1077, LNCaP=3169, str=1966, DU145=2073, str=1570
11338 tcgaexp gene=ZNF672, entrez=79894, pos=chr1:249132530-249143714(+), B=2606, L=2643, M=2682, H=2705