DMR 13305 chr4:78801-78950 (150bp)

DMR Stats
Positionchr4:78801-78950 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesZNF718, ZNF595 (0bp away)
ANODEV p-value0.0118027493192
FrequenciesBenign: 2.0 (28.57%), Low: 0.0 (0.0%), High: 3.0 (33.33 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
13305 ZNF718 21252 uc003fzt.4 chr4 53227 156490 + 150 100.0 3.1 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (100), E4 (0) 0.0
13305 ZNF595 21252 uc003fzu.1 chr4 53227 196092 + 150 100.0 2.07 1 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (100), E4 (0), I4 (0), E5 (0) 0.0
13305 ZNF595 21252 uc003fzv.1 chr4 53227 88099 + 150 100.0 40.91 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (100), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) 0.0
13305 ZNF595 21252 uc011bus.1 chr4 53227 88099 + 150 100.0 0.44 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0) 0.0
13305 ZNF595 21252 uc011but.1 chr4 53227 88099 + 150 100.0 0.54 0 0.0 E1 (0), I1 (100), E2 (0) 0.0
  • 5 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields

Omics Overlaps

Dmrid Omic Set Data Plot
13305 cellmeth_recounts PrEC: 3, LNCaP: 9, DU145: 14
13305 cellmeth_diffreps_PrECvsDU145 A=0, B=12, Length=200, Event=Up, log2FC=Inf, padj=0.00174045876043459
13305 cellexp id=ENSG00000197701, name=ZNF595, PrEC=56, str=36, LNCaP=2175, str=1720, DU145=83, str=94
13305 tcgaexp gene=YTHDC1, entrez=91746, pos=chr4:6027-69215824(-), B=4512, L=3976, M=4109, H=4458
13305 tcgaexp gene=ZNF595, entrez=152687, pos=chr4:53227-196092(+), B=502, L=637, M=656, H=769
13305 tcgaexp gene=ZNF718, entrez=255403, pos=chr4:53227-156490(+), B=244, L=237, M=227, H=291
13305 tcgaexp gene=DUX4L5, entrez=653545, pos=chr4:72836-191010142(+), B=0, L=0, M=0, H=0