DMR 20945 chr16:405901-406050 (150bp)

DMR Stats
Positionchr16:405901-406050 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesAXIN1 (3224bp away)
ANODEV p-value0.0201303400378
FrequenciesBenign: 6.0 (85.71%), Low: 2.0 (33.33%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
20945 chr16 405985 407984 cpgShelf — values(x.gr)[overs$srow, ]:13417
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
20945 cellmeth_recounts PrEC: 14, LNCaP: 34, DU145: 3
20945 cellmeth_diffreps_PrECvsDU145 A=24, B=2, Length=360, Event=Down, log2FC=-3.58, padj=0.000159268381260165
20945 cellmeth_diffreps_LNCaPvsDU145 A=31, B=1.87, Length=400, Event=Down, log2FC=-4.05, padj=6.16410269036887e-06