DMR 26677 chr2:219845601-219847850 (2250bp)

DMR Stats
Positionchr2:219845601-219847850 (View on UCSC)
Width2250bp
Genomic Context3' end
Nearest GenesFEV (0bp away)
ANODEV p-value9.72807441659e-08
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 4.0 (44.44 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
26677 FEV 17612 uc002vji.1 chr2 219845809 219850379 - 2042 90.76 0.03 0 0.0 E1 (0), I1 (0), E2 (0), I2 (38.8), E3 (52) 53.69
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
26677 chr2 219845506 219846335 wgEncodeRegDnaseClusteredV2 38 score:622, srow:683455
26677 chr2 219846386 219846535 wgEncodeRegDnaseClusteredV2 3 score:310, srow:683456
26677 chr2 219846546 219847270 wgEncodeRegDnaseClusteredV2 58 score:1000, srow:683457
26677 chr2 219847486 219847955 wgEncodeRegDnaseClusteredV2 16 score:397, srow:683458
26677 chr2 219845454 219845860 wgEncodeRegTfbsClusteredV3 CTCF score:554, expCount:22, expNums:174,595,597,598,603,604,605,606,607,609,627,628,629,630,631,635,645,646,648,650,654,673, expScores:120,213,223,299,259,395,205,179,127,100,232,290,249,554,307,217,253,144,230,151,129,134, srow:2394319
26677 chr2 219845537 219851174 wgEncodeRegTfbsClusteredV3 EZH2 score:1000, expCount:12, expNums:1,3,6,13,15,17,19,21,36,38,40,43, expScores:327,208,333,603,317,272,100,350,497,219,340,273, srow:2394320
26677 chr2 219845993 219846397 wgEncodeRegTfbsClusteredV3 CTCF score:422, expCount:25, expNums:5,137,174,290,595,598,603,604,607,609,628,629,630,638,645,647,652,653,659,661,665,669,681,685,688, expScores:261,273,138,112,284,254,128,159,150,266,281,233,270,113,422,112,176,129,130,122,152,121,126,128,176, srow:2394321
26677 chr2 219846041 219846296 wgEncodeRegTfbsClusteredV3 RAD21 score:413, expCount:2, expNums:149,355, expScores:413,185, srow:2394322
26677 chr2 219846069 219846378 wgEncodeRegTfbsClusteredV3 SUZ12 score:106, expCount:1, expNums:358, expScores:106, srow:2394323
26677 chr2 219846490 219848884 wgEncodeRegTfbsClusteredV3 SUZ12 score:309, expCount:2, expNums:358,578, expScores:309,152, srow:2394324
26677 chr2 219846400 219846408 tfbsConsSites V$ZIC1_01 score:945, zScore:2.25, srow:2977376
26677 chr2 219846400 219846408 tfbsConsSites V$ZIC3_01 score:976, zScore:2.75, srow:2977377
26677 chr2 219846407 219846416 tfbsConsSites V$HMX1_01 score:883, zScore:2.89, srow:2977378
26677 chr2 219846407 219846428 tfbsConsSites V$HEN1_02 score:757, zScore:1.76, srow:2977379
26677 chr2 219846419 219846447 tfbsConsSites V$MYOGNF1_01 score:775, zScore:2.34, srow:2977380
26677 chr2 219846429 219846442 tfbsConsSites V$ROAZ_01 score:756, zScore:1.91, srow:2977381
26677 chr2 219846447 219846459 tfbsConsSites V$CHOP_01 score:830, zScore:1.72, srow:2977382
26677 chr2 219846460 219846487 tfbsConsSites V$PAX5_02 score:784, zScore:2.04, srow:2977383
26677 chr2 219846536 219846564 tfbsConsSites V$MYOGNF1_01 score:761, zScore:2.11, srow:2977384
26677 chr2 219846588 219846615 tfbsConsSites V$PAX5_01 score:828, zScore:2.69, srow:2977385
26677 chr2 219846631 219846649 tfbsConsSites V$PAX2_01 score:791, zScore:2.15, srow:2977386
26677 chr2 219846631 219846651 tfbsConsSites V$PAX4_01 score:797, zScore:1.64, srow:2977387
26677 chr2 219846689 219846707 tfbsConsSites V$AHRARNT_02 score:773, zScore:1.72, srow:2977388
26677 chr2 219846690 219846717 tfbsConsSites V$PAX5_01 score:774, zScore:1.86, srow:2977389
26677 chr2 219846738 219846756 tfbsConsSites V$AHRARNT_02 score:786, zScore:1.96, srow:2977390
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  • 25 of 86 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
26677 cellmeth_recounts PrEC: 18, LNCaP: 4780, DU145: 17
26677 cellmeth_diffreps_PrECvsLNCaP A=27, B=3798, Length=2660, Event=Up, log2FC=7.14, padj=0
26677 cellmeth_diffreps_LNCaPvsDU145 A=4060.23, B=13.1, Length=2660, Event=Down, log2FC=-8.28, padj=0
26677 cellexp id=ENSG00000163497, name=FEV, PrEC=0, str=0, LNCaP=98, str=36, DU145=0, str=1
26677 tcgameth site:cg00260634, B=0.17, L=0.55, H=0.48
26677 tcgameth site:cg05997941, B=0.26, L=0.48, H=0.42
26677 tcgameth site:cg26830038, B=0.17, L=0.49, H=0.47
26677 tcgaexp gene=FEV, entrez=54738, pos=chr2:219845809-219850379(-), B=268, L=824, M=987, H=600