DMR 27197 chr3:140795801-140796200 (400bp)

DMR Stats
Positionchr3:140795801-140796200 (View on UCSC)
Width400bp
Genomic Contextintron
Nearest GenesSPSB4 (0bp away)
ANODEV p-value1.6596797936e-09
FrequenciesBenign: 0.0 (0.0%), Low: 2.0 (33.33%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
27197 SPSB4 20808 uc003ett.3 chr3 140770743 140867453 + 400 100.0 0.07 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0) 0.0
27197 SPSB4 20808 uc010hum.3 chr3 140784794 140867453 + 400 100.0 0.07 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
27197 chr3 140795246 140796375 wgEncodeRegDnaseClusteredV2 71 score:998, srow:840328
27197 chr3 140795596 140796472 wgEncodeRegTfbsClusteredV3 KAP1 score:469, expCount:2, expNums:365,588, expScores:367,308, srow:2898110
27197 chr3 140795710 140796005 wgEncodeRegTfbsClusteredV3 FOXP2 score:175, expCount:1, expNums:255, expScores:175, srow:2898111
27197 chr3 140795765 140796496 wgEncodeRegTfbsClusteredV3 TCF7L2 score:367, expCount:1, expNums:367, expScores:263, srow:2898112
27197 chr3 140796037 140796406 wgEncodeRegTfbsClusteredV3 CTCF score:114, expCount:2, expNums:16,18, expScores:106,114, srow:2898113
27197 chr3 140796094 140796337 wgEncodeRegTfbsClusteredV3 EGR1 score:155, expCount:1, expNums:216, expScores:155, srow:2898114
27197 chr3 140795821 140795828 tfbsConsSites V$MZF1_01 score:985, zScore:2.01, srow:3569680
27197 chr3 140795822 140795832 tfbsConsSites V$SREBP1_02 score:832, zScore:2.01, srow:3569681
27197 chr3 140795854 140795864 tfbsConsSites V$POU6F1_01 score:839, zScore:1.7, srow:3569682
27197 chr3 140795904 140795913 tfbsConsSites V$HMX1_01 score:814, zScore:1.75, srow:3569683
27197 chr3 140795917 140795931 tfbsConsSites V$BACH1_01 score:803, zScore:1.84, srow:3569684
27197 chr3 140796035 140796050 tfbsConsSites V$BRN2_01 score:813, zScore:1.95, srow:3569685
27197 chr3 140796046 140796060 tfbsConsSites V$HNF3B_01 score:876, zScore:2.01, srow:3569686
27197 chr3 140796046 140796063 tfbsConsSites V$FOXJ2_01 score:901, zScore:2.04, srow:3569687
27197 chr3 140796060 140796073 tfbsConsSites V$OCT1_06 score:876, zScore:1.95, srow:3569688
27197 chr3 140796074 140796092 tfbsConsSites V$ER_Q6 score:791, zScore:1.92, srow:3569689
27197 chr3 140796142 140796163 tfbsConsSites V$MEF2_03 score:906, zScore:3.81, srow:3569690
27197 chr3 140796146 140796161 tfbsConsSites V$RSRFC4_01 score:929, zScore:3.85, srow:3569691
27197 chr3 140796149 140796163 tfbsConsSites V$TATA_01 score:930, zScore:2.96, srow:3569692
27197 chr3 140795829 140795832 phastConsElements100way lod=14 score:255, srow:6152942
27197 chr3 140795895 140795911 phastConsElements100way lod=39 score:356, srow:6152943
27197 chr3 140795914 140795927 phastConsElements100way lod=50 score:381, srow:6152944
27197 chr3 140795935 140795961 phastConsElements100way lod=106 score:455, srow:6152945
27197 chr3 140795963 140795992 phastConsElements100way lod=81 score:429, srow:6152946
27197 chr3 140795998 140796031 phastConsElements100way lod=86 score:434, srow:6152947
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Omics Overlaps

Dmrid Omic Set Data Plot
27197 cellmeth_recounts PrEC: 1, LNCaP: 14, DU145: 6
27197 cellexp id=ENSG00000175093, name=SPSB4, PrEC=3, str=4, LNCaP=2, str=0, DU145=29, str=7
27197 tcgaexp gene=SPSB4, entrez=92369, pos=chr3:140770743-140867453(+), B=7, L=3, M=2, H=7