DMR 30180 chr8:145711851-145712100 (250bp)

DMR Stats
Positionchr8:145711851-145712100 (View on UCSC)
Width250bp
Genomic Contextintergenic
Nearest GenesPPP1R16A (3316bp away)
ANODEV p-value2.6413757242e-09
FrequenciesBenign: 3.0 (42.86%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
30180 chr8 145711681 145711970 wgEncodeRegDnaseClusteredV2 28 score:467, srow:1197589
30180 chr8 145711572 145712032 wgEncodeRegTfbsClusteredV3 CTCF score:488, expCount:28, expNums:5,9,16,24,44,137,213,493,609,631,639,640,643,644,657,658,659,660,661,662,663,673,674,676,678,680,682,688, expScores:278,179,138,208,137,204,316,247,172,310,288,207,133,133,242,93,221,105,283,359,95,488,225,153,203,233,158,140, srow:4109539
30180 chr8 145711648 145711891 wgEncodeRegTfbsClusteredV3 RAD21 score:435, expCount:3, expNums:149,231,355, expScores:435,280,149, srow:4109540
30180 chr8 145711707 145712022 wgEncodeRegTfbsClusteredV3 EP300 score:281, expCount:1, expNums:519, expScores:281, srow:4109541
  • 4 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
30180 cellmeth_recounts PrEC: 41, LNCaP: 10, DU145: 8
30180 cellmeth_diffreps_PrECvsLNCaP A=61, B=8, Length=400, Event=Down, log2FC=-2.93, padj=9.52332179174591e-10
30180 cellmeth_diffreps_PrECvsDU145 A=61, B=6, Length=400, Event=Down, log2FC=-3.35, padj=5.74296197520531e-11
30180 cellexp id=ENSG00000160972, name=PPP1R16A, PrEC=1017, str=905, LNCaP=2264, str=959, DU145=799, str=371