DMR 325 chr1:72067851-72068050 (200bp)

DMR Stats
Positionchr1:72067851-72068050 (View on UCSC)
Width200bp
Genomic Contextintron
Nearest GenesNEGR1 (0bp away)
ANODEV p-value0.00481886266354
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 3.0 (33.33 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
325 NEGR1 1036 uc001dfv.3 chr1 71868625 72566614 - 200 100.0 0.73 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (100), E6 (0), I6 (0), E7 (0) 0.0
325 NEGR1 1036 uc001dfw.3 chr1 71868625 72748405 - 200 100.0 2.98 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (100), E6 (0), I6 (0), E7 (0) 0.0
325 NEGR1 1036 uc010oqs.2 chr1 71868625 72748405 - 200 100.0 0.73 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0), I5 (0), E6 (0) 0.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields

Omics Overlaps

Dmrid Omic Set Data Plot
325 cellmeth_recounts PrEC: 1, LNCaP: 0, DU145: 5
325 cellexp id=ENSG00000172260, name=NEGR1, PrEC=88, str=68, LNCaP=2, str=1, DU145=0, str=0
325 tcgaexp gene=NEGR1, entrez=257194, pos=chr1:71868625-72748405(-), B=924, L=600, M=417, H=428
325 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305