DMR 32834 chr14:57274501-57276850 (2350bp)

DMR Stats
Positionchr14:57274501-57276850 (View on UCSC)
Width2350bp
Genomic Contextpromoter
Nearest GenesOTX2 (0bp away)
ANODEV p-value1.69296780037e-07
FrequenciesBenign: 0.0 (0.0%), Low: 2.0 (33.33%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
32834 OTX2 8275 uc001xcq.4 chr14 57267425 57277194 - 2350 100.0 0.67 0 6.64 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
32834 OTX2 8275 uc010aou.4 chr14 57267425 57277194 - 2350 100.0 0.5 0 6.64 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0) 0.0
32834 OTX2 8275 uc031qos.1 chr14 57267425 57277194 - 2350 100.0 0.86 0 6.64 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
32834 OTX2 8275 uc031qot.1 chr14 57267425 57277194 - 2350 100.0 0.86 0 6.64 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0) 0.0
  • 4 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
32834 chr14 57274361 57274935 wgEncodeRegDnaseClusteredV2 9 score:280, srow:356023
32834 chr14 57275006 57275695 wgEncodeRegDnaseClusteredV2 34 score:393, srow:356024
32834 chr14 57275706 57276375 wgEncodeRegDnaseClusteredV2 19 score:418, srow:356025
32834 chr14 57276426 57276695 wgEncodeRegDnaseClusteredV2 6 score:179, srow:356026
32834 chr14 57276701 57276795 wgEncodeRegDnaseClusteredV2 2 score:113, srow:356027
32834 chr14 57276806 57277515 wgEncodeRegDnaseClusteredV2 18 score:1000, srow:356028
32834 chr14 57274170 57274785 wgEncodeRegTfbsClusteredV3 CHD1 score:382, expCount:1, expNums:4, expScores:382, srow:1217577
32834 chr14 57274816 57278153 wgEncodeRegTfbsClusteredV3 EZH2 score:543, expCount:9, expNums:6,15,17,19,21,36,38,40,43, expScores:297,226,174,124,353,243,252,212,305, srow:1217578
32834 chr14 57275075 57275564 wgEncodeRegTfbsClusteredV3 TAF1 score:138, expCount:1, expNums:157, expScores:138, srow:1217579
32834 chr14 57275204 57276017 wgEncodeRegTfbsClusteredV3 CTBP2 score:217, expCount:1, expNums:348, expScores:155, srow:1217580
32834 chr14 57275224 57275743 wgEncodeRegTfbsClusteredV3 SIN3A score:180, expCount:1, expNums:357, expScores:180, srow:1217581
32834 chr14 57275310 57275685 wgEncodeRegTfbsClusteredV3 TBP score:137, expCount:1, expNums:359, expScores:137, srow:1217582
32834 chr14 57275825 57277185 wgEncodeRegTfbsClusteredV3 SUZ12 score:183, expCount:2, expNums:358,578, expScores:94,168, srow:1217583
32834 chr14 57276618 57277233 wgEncodeRegTfbsClusteredV3 CHD1 score:314, expCount:1, expNums:4, expScores:314, srow:1217584
32834 chr14 57274586 57274609 tfbsConsSites V$BRACH_01 score:683, zScore:1.76, srow:1560325
32834 chr14 57274667 57274677 tfbsConsSites V$CP2_01 score:903, zScore:2.14, srow:1560326
32834 chr14 57274670 57274697 tfbsConsSites V$PAX5_01 score:780, zScore:1.95, srow:1560327
32834 chr14 57274847 57274870 tfbsConsSites V$STAT5A_02 score:748, zScore:1.74, srow:1560328
32834 chr14 57274882 57274899 tfbsConsSites V$CART1_01 score:790, zScore:1.81, srow:1560329
32834 chr14 57274887 57274902 tfbsConsSites V$S8_01 score:853, zScore:1.73, srow:1560330
32834 chr14 57274888 57274898 tfbsConsSites V$PAX4_02 score:945, zScore:2.95, srow:1560331
32834 chr14 57274888 57274901 tfbsConsSites V$CHX10_01 score:828, zScore:2.13, srow:1560332
32834 chr14 57274907 57274917 tfbsConsSites V$POU6F1_01 score:868, zScore:2.17, srow:1560333
32834 chr14 57274908 57274917 tfbsConsSites V$LHX3_01 score:963, zScore:2.65, srow:1560334
32834 chr14 57274908 57274925 tfbsConsSites V$CART1_01 score:801, zScore:2.02, srow:1560335
  • Page 1 of 4
  • 25 of 85 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
32834 cellmeth_recounts PrEC: 11, LNCaP: 896, DU145: 151
32834 cellmeth_diffreps_PrECvsLNCaP A=17, B=713, Length=2620, Event=Up, log2FC=5.39, padj=0
32834 cellmeth_diffreps_PrECvsDU145 A=0, B=14, Length=260, Event=Up, log2FC=Inf, padj=0.000506195974236337
32834 cellmeth_diffreps_PrECvsDU145 A=0, B=27, Length=440, Event=Up, log2FC=Inf, padj=9.26891362789191e-08
32834 cellmeth_diffreps_PrECvsDU145 A=7, B=54, Length=640, Event=Up, log2FC=2.95, padj=1.55256002082426e-08
32834 cellmeth_diffreps_LNCaPvsDU145 A=703.43, B=83.25, Length=2100, Event=Down, log2FC=-3.08, padj=0
32834 cellmeth_diffreps_LNCaPvsDU145 A=49.18, B=14.03, Length=380, Event=Down, log2FC=-1.81, padj=0.000836759545096941
32834 cellexp id=ENSG00000165588, name=OTX2, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0
32834 tcgameth site:cg00822495, B=0.12, L=0.25, H=0.21
32834 tcgameth site:cg02036261, B=0.23, L=0.57, H=0.57
32834 tcgameth site:cg02086467, B=0.27, L=0.44, H=0.4
32834 tcgameth site:cg03091551, B=0.25, L=0.43, H=0.47
32834 tcgameth site:cg06966811, B=0.39, L=0.7, H=0.66
32834 tcgameth site:cg13023623, B=0.35, L=0.73, H=0.68
32834 tcgameth site:cg13411015, B=0.16, L=0.25, H=0.3
32834 tcgameth site:cg13784080, B=0.15, L=0.31, H=0.39
32834 tcgameth site:cg13826890, B=0.12, L=0.31, H=0.38
32834 tcgameth site:cg17205316, B=0.1, L=0.17, H=0.22
32834 tcgameth site:cg19600750, B=0.05, L=0.27, H=0.32
32834 tcgameth site:cg27122213, B=0.11, L=0.57, H=0.49
32834 tcgaexp gene=OTX2, entrez=5015, pos=chr14:57267425-57277194(-), B=0, L=0, M=0, H=0