DMR 35493 chr20:20196851-20197000 (150bp)

DMR Stats
Positionchr20:20196851-20197000 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesC20orf26 (0bp away)
ANODEV p-value0.0499495434724
FrequenciesBenign: 5.0 (71.43%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
35493 C20orf26 18066 uc002wru.3 chr20 20033158 20341346 + 150 100.0 0.46 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (100), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0), I21 (0), E22 (0), I22 (0), E23 (0), I23 (0), E24 (0), I24 (0), E25 (0), I25 (0), E26 (0), I26 (0), E27 (0) 0.0
35493 C20orf26 18066 uc010zse.2 chr20 20033158 20258102 + 150 100.0 1.79 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (100), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0), I21 (0), E22 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
35493 chr20 20196726 20196970 wgEncodeRegDnaseClusteredV2 3 score:177, srow:708919
35493 chr20 20196548 20197259 wgEncodeRegTfbsClusteredV3 KAP1 score:348, expCount:2, expNums:365,588, expScores:348,328, srow:2470691
35493 chr20 20196683 20197296 wgEncodeRegTfbsClusteredV3 EP300 score:244, expCount:1, expNums:304, expScores:150, srow:2470692
35493 chr20 20196756 20197135 wgEncodeRegTfbsClusteredV3 CHD2 score:148, expCount:1, expNums:288, expScores:148, srow:2470693
35493 chr20 20196857 20196872 tfbsConsSites V$TAL1ALPHAE47_01 score:934, zScore:2.84, srow:3075079
35493 chr20 20196857 20196872 tfbsConsSites V$TAL1BETAITF2_01 score:925, zScore:2.99, srow:3075080
35493 chr20 20196857 20196873 tfbsConsSites V$YY1_01 score:878, zScore:2.02, srow:3075081
35493 chr20 20196889 20196899 tfbsConsSites V$FOXO4_01 score:932, zScore:2.06, srow:3075082
35493 chr20 20196889 20196902 tfbsConsSites V$FOXO1_02 score:811, zScore:1.78, srow:3075083
35493 chr20 20196889 20196904 tfbsConsSites V$FREAC2_01 score:884, zScore:2.98, srow:3075084
35493 chr20 20196930 20196941 tfbsConsSites V$CREBP1_Q2 score:844, zScore:1.77, srow:3075085
35493 chr20 20196953 20196973 tfbsConsSites V$PPARG_01 score:731, zScore:1.76, srow:3075086
35493 chr20 20196972 20196993 tfbsConsSites V$MEF2_02 score:793, zScore:1.97, srow:3075087
35493 chr20 20196841 20196952 phastConsElements100way lod=650 score:635, srow:5300059
35493 chr20 20196956 20196963 phastConsElements100way lod=44 score:368, srow:5300060
35493 chr20 20196971 20196986 phastConsElements100way lod=94 score:443, srow:5300061
  • 16 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
35493 cellmeth_recounts PrEC: 6, LNCaP: 1, DU145: 9
35493 cellexp id=ENSG00000089101, name=C20orf26, PrEC=2, str=9, LNCaP=41, str=17, DU145=4, str=6
35493 tcgaexp gene=C20orf26, entrez=26074, pos=chr20:20033158-20341346(+), B=11, L=5, M=20, H=18