DMR 36504 chr1:1353851-1354050 (200bp)

DMR Stats
Positionchr1:1353851-1354050 (View on UCSC)
Width200bp
Genomic Context3' end
Nearest GenesANKRD65 (0bp away)
ANODEV p-value0.000970647098344
FrequenciesBenign: 0.0 (0.0%), Low: 2.0 (33.33%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
36504 ANKRD65 67 uc001afp.3 chr1 1353800 1356824 - 200 100.0 0.02 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (100) 100.0
36504 ANKRD65 67 uc001afq.3 chr1 1353800 1356824 - 200 100.0 0.02 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (100) 100.0
36504 ANKRD65 67 uc010nyo.2 chr1 1353800 1356824 - 200 100.0 0.04 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (100) 100.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36504 chr1 1353961 1354455 wgEncodeRegDnaseClusteredV2 14 score:438, srow:638
36504 chr1 1353826 1354135 wgEncodeRegTfbsClusteredV3 PAX5 score:227, expCount:2, expNums:100,101, expScores:227,163, srow:3684
36504 chr1 1353160 1355159 cpgShore — values(x.gr)[overs$srow, ]:141
  • 3 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36504 cellmeth_recounts PrEC: 2, LNCaP: 63, DU145: 5
36504 cellmeth_diffreps_PrECvsLNCaP A=3, B=336, Length=900, Event=Up, log2FC=6.81, padj=0
36504 cellmeth_diffreps_LNCaPvsDU145 A=359.2, B=13.1, Length=780, Event=Down, log2FC=-4.78, padj=0
36504 cellexp id=ENSG00000235098, name=ANKRD65, PrEC=1085, str=970, LNCaP=132, str=58, DU145=40, str=8
36504 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
36504 tcgaexp gene=ANKRD65, entrez=441869, pos=chr1:1353800-1356824(-), B=1211, L=786, M=656, H=482
36504 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305
36504 pubmed gene=ANKRD65, G=0, GP=0, GC=0, GM=0, GPM=0, GCM=0