DMR 36515 chr1:2146101-2146300 (200bp)

DMR Stats
Positionchr1:2146101-2146300 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesC1orf86 (6928bp away)
ANODEV p-value0.000223537377804
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 4.0 (44.44 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36515 chr1 2146241 2146590 wgEncodeRegDnaseClusteredV2 8 score:427, srow:1335
36515 chr1 2144498 2146497 cpgShore — values(x.gr)[overs$srow, ]:278
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36515 cellmeth_recounts PrEC: 13, LNCaP: 11, DU145: 0
36515 cellmeth_diffreps_PrECvsDU145 A=20, B=1, Length=360, Event=Down, log2FC=-4.32, padj=0.000246010682141716
36515 cellexp id=ENSG00000234396, name=RP11-181G12.4, PrEC=0, str=0, LNCaP=0, str=0, DU145=2, str=0
36515 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
36515 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305
36515 pubmed gene=C1orf86, G=0, GP=0, GC=0, GM=0, GPM=0, GCM=0