DMR Stats | |
---|---|
Position | chr1:10948501-10948650 (View on UCSC) |
Width | 150bp |
Genomic Context | intergenic |
Nearest Genes | C1orf127 (57879bp away) |
ANODEV p-value | 0.000635180481647 |
Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 7.0 (77.78 %) |
Frequent? |
Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
---|---|---|---|---|---|---|
36590 | chr1 | 10948381 | 10948735 | wgEncodeRegDnaseClusteredV2 | 31 | score:803, srow:8913 |
36590 | chr1 | 10948298 | 10948595 | wgEncodeRegTfbsClusteredV3 | CTCF | score:191, expCount:3, expNums:5,662,676, expScores:177,191,175, srow:27959 |
36590 | chr1 | 10948329 | 10948568 | wgEncodeRegTfbsClusteredV3 | RAD21 | score:167, expCount:1, expNums:149, expScores:167, srow:27960 |
36590 | chr1 | 10948499 | 10948504 | phastConsElements100way | lod=15 | score:262, srow:41880 |
Dmrid | Omic Set | Data | Plot |
---|---|---|---|
36590 | cellmeth_recounts | PrEC: 8, LNCaP: 251, DU145: 0 | |
36590 | cellmeth_diffreps_PrECvsLNCaP | A=140, B=1666, Length=2360, Event=Up, log2FC=3.57, padj=0 | |
36590 | cellmeth_diffreps_PrECvsDU145 | A=12, B=0, Length=280, Event=Down, log2FC=-Inf, padj=0.00174045876043459 | |
36590 | cellmeth_diffreps_LNCaPvsDU145 | A=1772.48, B=18.71, Length=2260, Event=Down, log2FC=-6.57, padj=0 | |
36590 | tcgaexp | gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019 | |
36590 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |