DMR Stats | |
---|---|
Position | chr1:100442851-100443000 (View on UCSC) |
Width | 150bp |
Genomic Context | intron |
Nearest Genes | SLC35A3 (0bp away) |
ANODEV p-value | 0.00628769317412 |
Frequencies | Benign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 1.0 (11.11 %) |
Frequent? |
Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
394 | SLC35A3 | 1213 | uc001dsp.2 | chr1 | 100435345 | 100492534 | + | 150 | 100.0 | 0.03 | 0 | 0.0 | E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0) | 0.0 |
394 | SLC35A3 | 1213 | uc001dsr.2 | chr1 | 100435992 | 100492534 | + | 150 | 100.0 | 0.02 | 0 | 0.0 | E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0) | 0.0 |
394 | SLC35A3 | 1213 | uc009wdy.2 | chr1 | 100435345 | 100492534 | + | 150 | 100.0 | 0.02 | 0 | 0.0 | E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) | 0.0 |
Dmrid | Omic Set | Data | Plot |
---|---|---|---|
394 | cellmeth_recounts | PrEC: 4, LNCaP: 6, DU145: 10 | |
394 | cellexp | id=ENSG00000117620, name=SLC35A3, PrEC=2388, str=6027, LNCaP=2986, str=4006, DU145=2246, str=2848 | |
394 | tcgaexp | gene=SLC35A3, entrez=23443, pos=chr1:100435345-100492534(+), B=1722, L=2201, M=2055, H=2245 | |
394 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |