DMR 47388 chr1:918351-918500 (150bp)

DMR Stats
Positionchr1:918351-918500 (View on UCSC)
Width150bp
Genomic Contextpromoter
Nearest GenesC1orf170 (877bp away)
ANODEV p-value0.028215311482
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
47388 chr1 917992 918621 wgEncodeRegTfbsClusteredV3 EZH2 score:358, expCount:1, expNums:40, expScores:358, srow:828
47388 chr1 917727 919726 cpgShore — values(x.gr)[overs$srow, ]:40
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
47388 cellmeth_recounts PrEC: 35, LNCaP: 9, DU145: 3
47388 cellmeth_diffreps_PrECvsLNCaP A=333, B=45, Length=1380, Event=Down, log2FC=-2.89, padj=0
47388 cellmeth_diffreps_PrECvsDU145 A=333, B=12, Length=1380, Event=Down, log2FC=-4.79, padj=0
47388 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
47388 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305