DMR 47403 chr1:2729651-2729800 (150bp)

DMR Stats
Positionchr1:2729651-2729800 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesTTC34 (23420bp away)
ANODEV p-value0.00828442544067
FrequenciesBenign: 3.0 (42.86%), Low: 6.0 (100.0%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
47403 chr1 2729386 2729710 wgEncodeRegDnaseClusteredV2 5 score:354, srow:1880
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
47403 cellmeth_recounts PrEC: 13, LNCaP: 0, DU145: 5
47403 cellmeth_diffreps_PrECvsLNCaP A=78, B=0, Length=760, Event=Down, log2FC=-Inf, padj=0
47403 cellmeth_diffreps_PrECvsDU145 A=78, B=6, Length=740, Event=Down, log2FC=-3.7, padj=0
47403 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
47403 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305