DMR 47408 chr1:2800651-2800800 (150bp)

DMR Stats
Positionchr1:2800651-2800800 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesTTC34 (94420bp away)
ANODEV p-value0.00537004634615
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
47408 chr1 2800721 2800935 wgEncodeRegDnaseClusteredV2 2 score:267, srow:1944
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
47408 cellmeth_recounts PrEC: 94, LNCaP: 6, DU145: 8
47408 cellmeth_diffreps_PrECvsLNCaP A=463, B=5, Length=2420, Event=Down, log2FC=-6.53, padj=0
47408 cellmeth_diffreps_PrECvsDU145 A=395, B=21, Length=1900, Event=Down, log2FC=-4.23, padj=0
47408 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
47408 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305