DMR 47409 chr1:2820051-2820250 (200bp)

DMR Stats
Positionchr1:2820051-2820250 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesTTC34 (113820bp away)
ANODEV p-value0.0175422004534
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
47409 chr1 2820126 2820315 wgEncodeRegDnaseClusteredV2 2 score:197, srow:1963
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
47409 cellmeth_recounts PrEC: 74, LNCaP: 0, DU145: 8
47409 cellmeth_diffreps_PrECvsLNCaP A=358, B=1, Length=2060, Event=Down, log2FC=-8.48, padj=0
47409 cellmeth_diffreps_PrECvsDU145 A=358, B=15, Length=2060, Event=Down, log2FC=-4.58, padj=0
47409 tcgameth site:cg13874287, B=0.98, L=0.94, H=0.86
47409 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
47409 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305