DMR 52 chr1:4271351-4271550 (200bp)

DMR Stats
Positionchr1:4271351-4271550 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesLOC284661 (200560bp away)
ANODEV p-value0.00257035408459
FrequenciesBenign: 3.0 (42.86%), Low: 6.0 (100.0%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
52 chr1 4271488 4271502 tfbsConsSites V$OCT1_02 score:837, zScore:1.77, srow:7498
52 chr1 4271495 4271503 tfbsConsSites V$STAT_01 score:931, zScore:2.17, srow:7499
52 chr1 4271538 4271545 tfbsConsSites V$NKX25_02 score:978, zScore:2.85, srow:7500
52 chr1 4271481 4271495 phastConsElements100way lod=30 score:330, srow:17352
  • 4 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
52 cellmeth_recounts PrEC: 0, LNCaP: 1, DU145: 5
52 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
52 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305