DMR 5702 chr10:131362051-131362250 (200bp)

DMR Stats
Positionchr10:131362051-131362250 (View on UCSC)
Width200bp
Genomic Contextintron
Nearest GenesMGMT (0bp away)
ANODEV p-value0.0499046290344
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
5702 MGMT 4017 uc001lkh.2 chr10 131265454 131565783 + 200 100.0 0.51 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields

Omics Overlaps

Dmrid Omic Set Data Plot
5702 cellmeth_recounts PrEC: 53, LNCaP: 6, DU145: 4
5702 cellmeth_diffreps_PrECvsLNCaP A=80, B=6, Length=460, Event=Down, log2FC=-3.74, padj=0
5702 cellmeth_diffreps_PrECvsDU145 A=80, B=3, Length=440, Event=Down, log2FC=-4.74, padj=0
5702 cellexp id=ENSG00000170430, name=MGMT, PrEC=1524, str=709, LNCaP=2123, str=1602, DU145=1373, str=1203
5702 tcgaexp gene=MGMT, entrez=4255, pos=chr10:131265454-131565783(+), B=1171, L=1621, M=1615, H=1077
5702 tcgaexp gene=DUX4, entrez=22947, pos=chr10:76142-191000255(+), B=0, L=0, M=0, H=0