DMR 6780 chr13:50654201-50654350 (150bp)

DMR Stats
Positionchr13:50654201-50654350 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesDLEU2 (0bp away)
ANODEV p-value0.0499510195637
FrequenciesBenign: 1.0 (14.29%), Low: 4.0 (66.67%), High: 4.0 (44.44 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
6780 DLEU2 7549 uc001vdn.1 chr13 50556688 50699677 - 150 100.0 2.13 1 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0) 0.0
6780 DLEU2 7549 uc001vdo.1 chr13 50556688 50699677 - 150 100.0 2.13 1 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0) 0.0
6780 DLEU2 7553 uc001vdx.3 chr13 50618048 50656139 - 150 100.0 7.74 1 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) 0.0
6780 DLEU2 7553 uc001vdy.3 chr13 50618048 50656139 - 150 100.0 4.2 1 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
6780 DLEU2 7553 uc001vdz.3 chr13 50618048 50656139 - 150 100.0 2.52 1 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0) 0.0
6780 DLEU2 7553 uc001veb.2 chr13 50623325 50656139 - 150 100.0 4.21 1 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0) 0.0
  • 6 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
6780 chr13 50654201 50654970 wgEncodeRegDnaseClusteredV2 77 score:497, srow:324692
6780 chr13 50654139 50654594 wgEncodeRegTfbsClusteredV3 SIN3AK20 score:160, expCount:1, expNums:195, expScores:160, srow:1114567
6780 chr13 50654202 50654511 wgEncodeRegTfbsClusteredV3 E2F4 score:203, expCount:1, expNums:562, expScores:203, srow:1114568
6780 chr13 50654299 50654304 phastConsElements100way lod=13 score:247, srow:2379275
6780 chr13 50654314 50654318 phastConsElements100way lod=12 score:240, srow:2379276
6780 chr13 50654345 50654358 phastConsElements100way lod=21 score:295, srow:2379277
6780 chr13 50653282 50655281 cpgShore — values(x.gr)[overs$srow, ]:11843
  • 7 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
6780 cellmeth_recounts PrEC: 1, LNCaP: 0, DU145: 0
6780 cellexp id=ENSG00000231607, name=DLEU2, PrEC=227, str=20, LNCaP=110, str=320, DU145=123, str=299
6780 tcgaexp gene=DLEU2, entrez=8847, pos=chr13:50556688-50699677(-), B=50, L=33, M=39, H=59