DMR 700 chr1:249144551-249144700 (150bp)
| DMR Stats | |
|---|---|
| Position | chr1:249144551-249144700 (View on UCSC) |
| Width | 150bp |
| Genomic Context | 3' end |
| Nearest Genes | ZNF692 (0bp away) |
| ANODEV p-value | 0.0415278186884 |
| Frequencies | Benign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 700 | ZNF692 | 2868 | uc001iez.2 | chr1 | 249144203 | 249150234 | - | 150 | 100.0 | 0.25 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (100) | 100.0 |
| 700 | ZNF692 | 2868 | uc001ifb.2 | chr1 | 249144203 | 249152912 | - | 150 | 100.0 | 0.19 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (100) | 100.0 |
| 700 | ZNF692 | 2868 | uc001ifc.2 | chr1 | 249144203 | 249153315 | - | 150 | 100.0 | 0.35 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (100) | 100.0 |
| 700 | ZNF692 | 2868 | uc001iff.2 | chr1 | 249144203 | 249153315 | - | 150 | 100.0 | 0.06 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (100) | 100.0 |
| 700 | ZNF692 | 2868 | uc010pzr.2 | chr1 | 249144203 | 249153125 | - | 150 | 100.0 | 0.06 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (100) | 100.0 |
| 700 | ZNF692 | 2868 | uc031pta.1 | chr1 | 249144203 | 249152264 | - | 150 | 100.0 | 0.31 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (100) | 100.0 |
- 6 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 700 | chr1 | 249144366 | 249144575 | wgEncodeRegDnaseClusteredV2 | 5 | score:165, srow:119928 |
| 700 | chr1 | 249144666 | 249145635 | wgEncodeRegDnaseClusteredV2 | 46 | score:455, srow:119929 |
| 700 | chr1 | 249142387 | 249145039 | wgEncodeRegTfbsClusteredV3 | POLR2A | score:344, expCount:12, expNums:61,62,191,229,249,326,403,521,523,526,564,634, expScores:299,205,264,317,162,344,227,177,179,325,165,281, srow:438061 |
| 700 | chr1 | 249144623 | 249144630 | tfbsConsSites | V$STAT3_02 | score:990, zScore:1.75, srow:500890 |
| 700 | chr1 | 249144666 | 249144675 | tfbsConsSites | V$MYB_Q6 | score:947, zScore:2.33, srow:500891 |
| 700 | chr1 | 249144684 | 249144695 | tfbsConsSites | V$E2F_03 | score:857, zScore:1.83, srow:500892 |
| 700 | chr1 | 249144690 | 249144705 | tfbsConsSites | V$FREAC3_01 | score:850, zScore:2.61, srow:500893 |
| 700 | chr1 | 249144602 | 249144602 | cosmic | COSM907404 | srow:128720 |
| 700 | chr1 | 249144609 | 249144609 | cosmic | COSM1341206 | srow:128721 |
| 700 | chr1 | 249144659 | 249144659 | cosmic | COSM210733 | srow:128722 |
| 700 | chr1 | 249144554 | 249144567 | phastConsElements100way | lod=123 | score:470, srow:866131 |
| 700 | chr1 | 249144572 | 249144576 | phastConsElements100way | lod=50 | score:381, srow:866132 |
| 700 | chr1 | 249144581 | 249144582 | phastConsElements100way | lod=23 | score:304, srow:866133 |
| 700 | chr1 | 249144584 | 249144588 | phastConsElements100way | lod=49 | score:379, srow:866134 |
| 700 | chr1 | 249144590 | 249144600 | phastConsElements100way | lod=81 | score:429, srow:866135 |
| 700 | chr1 | 249144605 | 249144609 | phastConsElements100way | lod=48 | score:377, srow:866136 |
| 700 | chr1 | 249144611 | 249144614 | phastConsElements100way | lod=32 | score:337, srow:866137 |
| 700 | chr1 | 249144617 | 249144627 | phastConsElements100way | lod=81 | score:429, srow:866138 |
| 700 | chr1 | 249144629 | 249144635 | phastConsElements100way | lod=30 | score:330, srow:866139 |
| 700 | chr1 | 249144638 | 249144639 | phastConsElements100way | lod=13 | score:247, srow:866140 |
| 700 | chr1 | 249144644 | 249144648 | phastConsElements100way | lod=34 | score:343, srow:866141 |
| 700 | chr1 | 249144653 | 249144699 | phastConsElements100way | lod=317 | score:564, srow:866142 |
| 700 | chr1 | 249142797 | 249144796 | cpgShore | — | values(x.gr)[overs$srow, ]:4541 |
- 23 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 700 | cellmeth_recounts | PrEC: 51, LNCaP: 26, DU145: 5 |  |
| 700 | cellmeth_diffreps_PrECvsLNCaP | A=77, B=24, Length=380, Event=Down, log2FC=-1.68, padj=3.78541296034784e-06 |  |
| 700 | cellmeth_diffreps_PrECvsDU145 | A=96, B=8, Length=680, Event=Down, log2FC=-3.58, padj=0 |  |
| 700 | cellexp | id=ENSG00000171163, name=ZNF692, PrEC=1617, str=2426, LNCaP=3150, str=1403, DU145=1501, str=1289 |  |
| 700 | tcgameth | site:cg15651819, B=0.92, L=0.92, H=0.91 |  |
| 700 | tcgaexp | gene=ZNF692, entrez=55657, pos=chr1:249144203-249153315(-), B=1093, L=1616, M=1590, H=1627 |  |