DMR 27197 chr3:140795801-140796200 (400bp)

DMR Stats
Positionchr3:140795801-140796200 (View on UCSC)
Width400bp
Genomic Contextintron
Nearest GenesSPSB4 (0bp away)
ANODEV p-value1.6596797936e-09
FrequenciesBenign: 0.0 (0.0%), Low: 2.0 (33.33%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
27197 SPSB4 20808 uc003ett.3 chr3 140770743 140867453 + 400 100.0 0.07 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0) 0.0
27197 SPSB4 20808 uc010hum.3 chr3 140784794 140867453 + 400 100.0 0.07 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
27197 chr3 140796034 140796103 phastConsElements100way lod=241 score:536, srow:6152948
27197 chr3 140796110 140796118 phastConsElements100way lod=17 score:274, srow:6152949
27197 chr3 140796147 140796158 phastConsElements100way lod=48 score:377, srow:6152950
27197 chr3 140796186 140796195 phastConsElements100way lod=24 score:308, srow:6152951

Omics Overlaps

Dmrid Omic Set Data Plot
27197 cellmeth_recounts PrEC: 1, LNCaP: 14, DU145: 6
27197 cellexp id=ENSG00000175093, name=SPSB4, PrEC=3, str=4, LNCaP=2, str=0, DU145=29, str=7
27197 tcgaexp gene=SPSB4, entrez=92369, pos=chr3:140770743-140867453(+), B=7, L=3, M=2, H=7