DMR 70 chr1:6266601-6266750 (150bp)

DMR Stats
Positionchr1:6266601-6266750 (View on UCSC)
Width150bp
Genomic Contextpromoter
Nearest GenesRNF207 (0bp away)
ANODEV p-value0.00401870342221
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 3.0 (33.33 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
70 RNF207 144 uc001amf.1 chr1 6266189 6268366 + 150 100.0 0.18 0 58.67 E1 (0), I1 (0), E2 (100), I2 (0), E3 (0) 0.0
70 RNF207 144 uc001amg.3 chr1 6266189 6281359 + 150 100.0 0.24 0 58.67 E1 (0), I1 (0), E2 (100), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
70 chr1 6265826 6266778 cpgIsland CpG: 96 length:953, cpgNum:96, gcNum:687, perCpg:20.1, perGc:72.1, obsExp:0.78, srow:318

Omics Overlaps

Dmrid Omic Set Data Plot
70 cellmeth_recounts PrEC: 0, LNCaP: 11, DU145: 0
70 cellexp id=ENSG00000116251, name=RPL22, PrEC=7011, str=3775, LNCaP=9345, str=7785, DU145=3808, str=5248
70 cellexp id=ENSG00000158286, name=RNF207, PrEC=772, str=1489, LNCaP=542, str=266, DU145=993, str=933
70 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
70 tcgaexp gene=RNF207, entrez=388591, pos=chr1:6266189-6281359(+), B=476, L=319, M=304, H=325
70 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305