DMR Stats | |
---|---|
Position | chr1:2264851-2265000 (View on UCSC) |
Width | 150bp |
Genomic Context | intron |
Nearest Genes | MORN1 (0bp away) |
ANODEV p-value | 0.00242865181235 |
Frequencies | Benign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 0.0 (0.0 %) |
Frequent? |
Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
22 | MORN1 | 99 | uc001ajb.1 | chr1 | 2252696 | 2322993 | - | 150 | 100.0 | 2.13 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (100), E13 (0), I13 (0), E14 (0) | 0.0 |
22 | MORN1 | 99 | uc009vld.3 | chr1 | 2263565 | 2322993 | - | 150 | 100.0 | 0.62 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (100), E12 (0) | 0.0 |
Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
---|---|---|---|---|---|---|
22 | chr1 | 2264008 | 2266007 | cpgShore | — | values(x.gr)[overs$srow, ]:296 |
Dmrid | Omic Set | Data | Plot |
---|---|---|---|
22 | cellmeth_recounts | PrEC: 9, LNCaP: 0, DU145: 1 | |
22 | cellmeth_diffreps_PrECvsLNCaP | A=53, B=5, Length=440, Event=Down, log2FC=-3.41, padj=8.64550389218078e-10 | |
22 | cellmeth_diffreps_PrECvsDU145 | A=54, B=1, Length=500, Event=Down, log2FC=-5.75, padj=7.20014279297626e-14 | |
22 | cellexp | id=ENSG00000116151, name=MORN1, PrEC=59, str=110, LNCaP=366, str=166, DU145=90, str=55 | |
22 | tcgaexp | gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019 | |
22 | tcgaexp | gene=MORN1, entrez=79906, pos=chr1:2252696-2322993(-), B=219, L=217, M=237, H=224 | |
22 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |