DMR Stats
Positionchr1:1730401-1730550 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesGNB1 (0bp away)
ANODEV p-value0.0208887983625
FrequenciesBenign: 4.0 (57.14%), Low: 6.0 (100.0%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
16 GNB1 87 uc001aif.3 chr1 1716725 1822526 - 150 100.0 0.58 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (100), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0) 0.0
16 GNB1 87 uc009vky.3 chr1 1716725 1822526 - 150 100.0 0.43 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (100), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0) 0.0
  • 2 geness

Feature Overlaps

Omics Overlaps

Dmrid Omic Set Data Plot
16 cellmeth_recounts PrEC: 4, LNCaP: 0, DU145: 15
16 cellmeth_diffreps_LNCaPvsDU145 A=0, B=14.97, Length=260, Event=Up, log2FC=Inf, padj=0.000816028517810598
16 cellexp id=ENSG00000078369, name=GNB1, PrEC=38579, str=33386, LNCaP=29543, str=28442, DU145=25531, str=29177
16 tcgaexp gene=GNB1, entrez=2782, pos=chr1:1716725-1822526(-), B=21249, L=22376, M=22294, H=24786
16 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
16 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305