DMR Stats
Positionchr5:140012251-140012800 (View on UCSC)
Width550bp
Genomic Contextpromoter
Nearest GenesCD14 (0bp away)
ANODEV p-value4.19443505286e-06
FrequenciesBenign: 0.0 (0.0%), Low: 2.0 (33.33%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
28149 CD14 23185 uc003lgi.2 chr5 140011313 140013035 - 550 100.0 0.01 0 48.18 E1 (26.73), I1 (16.18), E2 (57.27) 11.27
28149 CD14 23185 uc003lgj.2 chr5 140011313 140013286 - 550 100.0 0.01 0 2.55 E1 (0), I1 (4.36), E2 (22.55), I2 (16.18), E3 (57.27) 11.27
28149 CD14 23185 uc021yej.1 chr5 140011313 140013286 - 550 100.0 0.01 0 2.55 E1 (0), I1 (0), E2 (26.73), I2 (16.18), E3 (57.27) 11.27
28149 CD14 23185 uc021yek.1 chr5 140011313 140013286 - 550 100.0 0.01 0 2.55 E1 (0), I1 (4.36), E2 (22.55), I2 (16.18), E3 (57.27) 11.27
28149 CD14 23185 uc021yel.1 chr5 140011443 140012573 - 323 58.73 0.03 0 100.0 E1 (58.73) 34.91
  • 5 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
28149 chr5 140011601 140013095 wgEncodeRegDnaseClusteredV2 113 score:1000, srow:974195
28149 chr5 140011552 140012830 wgEncodeRegTfbsClusteredV3 EZH2 score:400, expCount:2, expNums:21,36, expScores:322,317, srow:3331606
28149 chr5 140011922 140012291 wgEncodeRegTfbsClusteredV3 RUNX3 score:382, expCount:1, expNums:109, expScores:382, srow:3331610
28149 chr5 140012041 140012476 wgEncodeRegTfbsClusteredV3 MAX score:241, expCount:1, expNums:296, expScores:241, srow:3331612
28149 chr5 140012135 140012424 wgEncodeRegTfbsClusteredV3 CTCF score:122, expCount:2, expNums:607,650, expScores:122,114, srow:3331613
28149 chr5 140012306 140012575 wgEncodeRegTfbsClusteredV3 MAFK score:272, expCount:1, expNums:464, expScores:272, srow:3331614
28149 chr5 140012556 140013152 wgEncodeRegTfbsClusteredV3 CTCF score:291, expCount:20, expNums:16,37,44,174,595,597,603,628,629,631,641,645,646,652,659,661,662,673,682,685, expScores:139,130,191,116,179,110,117,165,194,181,89,160,150,167,199,186,291,166,147,181, srow:3331615
28149 chr5 140012629 140013204 wgEncodeRegTfbsClusteredV3 TCF12 score:238, expCount:1, expNums:66, expScores:238, srow:3331616
28149 chr5 140012650 140012985 wgEncodeRegTfbsClusteredV3 SP1 score:131, expCount:1, expNums:196, expScores:131, srow:3331617
28149 chr5 140012727 140013017 wgEncodeRegTfbsClusteredV3 STAT3 score:748, expCount:5, expNums:565,566,567,568,569, expScores:287,748,591,577,518, srow:3331618
28149 chr5 140012736 140013251 wgEncodeRegTfbsClusteredV3 TFAP2C score:328, expCount:1, expNums:370, expScores:328, srow:3331619
28149 chr5 140012751 140013280 wgEncodeRegTfbsClusteredV3 TFAP2A score:187, expCount:1, expNums:369, expScores:187, srow:3331620
28149 chr5 140012344 140012371 tfbsConsSites V$PAX5_02 score:794, zScore:2.21, srow:4252925
28149 chr5 140012348 140012360 tfbsConsSites V$PAX3_01 score:861, zScore:2.98, srow:4252926
28149 chr5 140012487 140012505 tfbsConsSites V$ER_Q6 score:784, zScore:1.8, srow:4252927
28149 chr5 140012783 140012796 tfbsConsSites V$CEBPA_01 score:875, zScore:1.65, srow:4252928
28149 chr5 140012784 140012795 tfbsConsSites V$E4BP4_01 score:848, zScore:2.15, srow:4252929
28149 chr5 140012785 140012794 tfbsConsSites V$HLF_01 score:874, zScore:1.83, srow:4252930
28149 chr5 140012786 140012793 tfbsConsSites V$CREBP1_01 score:918, zScore:2.45, srow:4252931
28149 chr5 140012268 140012268 cosmic COSM1433643 srow:970182
28149 chr5 140012442 140012442 cosmic COSM1486340 srow:970183
28149 chr5 140012506 140012506 cosmic COSM1292029 srow:970184
28149 chr5 140012532 140012532 cosmic COSM1061724 srow:970185
28149 chr5 140012264 140012269 phastConsElements100way lod=25 score:312, srow:7314903
28149 chr5 140012285 140012289 phastConsElements100way lod=21 score:295, srow:7314904
  • Page 1 of 2
  • 25 of 46 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
28149 cellmeth_recounts PrEC: 1, LNCaP: 45, DU145: 10
28149 cellmeth_diffreps_PrECvsLNCaP A=0, B=38, Length=600, Event=Up, log2FC=Inf, padj=3.80001230326287e-11
28149 cellmeth_diffreps_LNCaPvsDU145 A=35.28, B=2.81, Length=420, Event=Down, log2FC=-3.65, padj=2.93749481993901e-06
28149 cellexp id=ENSG00000170458, name=CD14, PrEC=67, str=53, LNCaP=5, str=3, DU145=82, str=21
28149 tcgameth site:cg12143439, B=0.16, L=0.32, H=0.33
28149 tcgameth site:cg20943084, B=0.26, L=0.42, H=0.46
28149 tcgameth site:cg25358289, B=0.37, L=0.5, H=0.52
28149 tcgaexp gene=CD14, entrez=929, pos=chr5:140011313-140013286(-), B=1646, L=1718, M=1490, H=1430