DMR Stats
Positionchr5:140011801-140012100 (View on UCSC)
Width300bp
Genomic Contextpromoter
Nearest GenesCD14 (0bp away)
ANODEV p-value7.39764043758e-07
FrequenciesBenign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
38090 CD14 23185 uc003lgj.2 chr5 140011313 140013286 - 300 100.0 0.81 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (100) 100.0
38090 CD14 23185 uc021yej.1 chr5 140011313 140013286 - 300 100.0 0.21 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (100) 100.0
38090 CD14 23185 uc021yek.1 chr5 140011313 140013286 - 300 100.0 0.21 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (100) 100.0
38090 CD14 23185 uc003lgi.2 chr5 140011313 140013035 - 300 100.0 0.09 0 0.0 E1 (0), I1 (0), E2 (100) 100.0
38090 CD14 23185 uc021yel.1 chr5 140011443 140012573 - 300 100.0 0.21 0 9.0 E1 (100) 100.0
  • 5 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
38090 chr5 140011601 140013095 wgEncodeRegDnaseClusteredV2 113 score:1000, srow:974195
38090 chr5 140011552 140012830 wgEncodeRegTfbsClusteredV3 EZH2 score:400, expCount:2, expNums:21,36, expScores:322,317, srow:3331606
38090 chr5 140011851 140012160 wgEncodeRegTfbsClusteredV3 E2F4 score:175, expCount:1, expNums:562, expScores:175, srow:3331607
38090 chr5 140011894 140012169 wgEncodeRegTfbsClusteredV3 STAT3 score:151, expCount:1, expNums:566, expScores:151, srow:3331608
38090 chr5 140011916 140012225 wgEncodeRegTfbsClusteredV3 MYC score:245, expCount:1, expNums:560, expScores:245, srow:3331609
38090 chr5 140011922 140012291 wgEncodeRegTfbsClusteredV3 RUNX3 score:382, expCount:1, expNums:109, expScores:382, srow:3331610
38090 chr5 140012004 140012243 wgEncodeRegTfbsClusteredV3 EGR1 score:256, expCount:1, expNums:87, expScores:256, srow:3331611
38090 chr5 140012041 140012476 wgEncodeRegTfbsClusteredV3 MAX score:241, expCount:1, expNums:296, expScores:241, srow:3331612
38090 chr5 140011824 140011847 tfbsConsSites V$COMP1_01 score:787, zScore:1.73, srow:4252913
38090 chr5 140011829 140011856 tfbsConsSites V$PAX5_01 score:794, zScore:2.17, srow:4252914
38090 chr5 140012029 140012042 tfbsConsSites V$CEBPA_01 score:966, zScore:3.38, srow:4252915
38090 chr5 140012029 140012042 tfbsConsSites V$CEBPB_02 score:872, zScore:2.17, srow:4252916
38090 chr5 140011930 140011930 cosmic COSM1433641 srow:970173
38090 chr5 140011992 140011992 cosmic COSM1061723 srow:970174
38090 chr5 140012007 140012007 cosmic COSM736421 srow:970175
38090 chr5 140012043 140012043 cosmic COSM589772 srow:970176
38090 chr5 140012055 140012055 cosmic COSM1580113 srow:970177
38090 chr5 140012070 140012070 cosmic COSM1619575 srow:970178
38090 chr5 140012075 140012075 cosmic COSM248765 srow:970179
38090 chr5 140011786 140011806 phastConsElements100way lod=109 score:458, srow:7314875
38090 chr5 140011808 140011809 phastConsElements100way lod=15 score:262, srow:7314876
38090 chr5 140011821 140011824 phastConsElements100way lod=15 score:262, srow:7314877
38090 chr5 140011846 140011851 phastConsElements100way lod=35 score:345, srow:7314878
38090 chr5 140011862 140011865 phastConsElements100way lod=22 score:300, srow:7314879
38090 chr5 140011880 140011881 phastConsElements100way lod=12 score:240, srow:7314880
  • Page 1 of 2
  • 25 of 41 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
38090 cellmeth_recounts PrEC: 0, LNCaP: 24, DU145: 18
38090 cellmeth_diffreps_PrECvsLNCaP A=0, B=21, Length=380, Event=Up, log2FC=Inf, padj=4.02459409075954e-06
38090 cellmeth_diffreps_PrECvsLNCaP A=0, B=38, Length=600, Event=Up, log2FC=Inf, padj=3.80001230326287e-11
38090 cellexp id=ENSG00000170458, name=CD14, PrEC=67, str=53, LNCaP=5, str=3, DU145=82, str=21
38090 tcgameth site:cg02343503, B=0.1, L=0.12, H=0.21
38090 tcgaexp gene=CD14, entrez=929, pos=chr5:140011313-140013286(-), B=1646, L=1718, M=1490, H=1430
38090 pubmed gene=CD14, G=11192, GP=43, GC=1987, GM=30, GPM=1, GCM=6