DMR Stats
Positionchr1:2280401-2280600 (View on UCSC)
Width200bp
Genomic Contextintron
Nearest GenesMORN1 (0bp away)
ANODEV p-value9.88278805965e-07
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 0.0 (0.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
23 MORN1 99 uc001ajb.1 chr1 2252696 2322993 - 200 100.0 0.62 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (100), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0) 0.0
23 MORN1 99 uc009vld.3 chr1 2263565 2322993 - 200 100.0 2.43 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (100), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
23 chr1 2280226 2280975 wgEncodeRegDnaseClusteredV2 8 score:258, srow:1481
23 chr1 2279916 2280511 wgEncodeRegTfbsClusteredV3 NFIC score:235, expCount:1, expNums:97, expScores:235, srow:7221
23 chr1 2279962 2280591 wgEncodeRegTfbsClusteredV3 STAT5A score:376, expCount:1, expNums:114, expScores:376, srow:7222
23 chr1 2280032 2280431 wgEncodeRegTfbsClusteredV3 BCL3 score:808, expCount:1, expNums:83, expScores:808, srow:7224
23 chr1 2280109 2280401 wgEncodeRegTfbsClusteredV3 NFATC1 score:689, expCount:1, expNums:96, expScores:689, srow:7225
23 chr1 2278658 2280657 cpgShelf values(x.gr)[overs$srow, ]:178
  • 6 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
23 cellmeth_recounts PrEC: 13, LNCaP: 4, DU145: 6
23 cellmeth_diffreps_PrECvsLNCaP A=1091, B=225, Length=1620, Event=Down, log2FC=-2.28, padj=0
23 cellmeth_diffreps_PrECvsDU145 A=1089, B=43, Length=1600, Event=Down, log2FC=-4.66, padj=0
23 cellmeth_diffreps_LNCaPvsDU145 A=213.81, B=30.87, Length=620, Event=Down, log2FC=-2.79, padj=0
23 cellexp id=ENSG00000116151, name=MORN1, PrEC=59, str=110, LNCaP=366, str=166, DU145=90, str=55
23 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
23 tcgaexp gene=MORN1, entrez=79906, pos=chr1:2252696-2322993(-), B=219, L=217, M=237, H=224
23 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305