DMR Stats
Positionchr19:36450351-36451150 (View on UCSC)
Width800bp
Genomic Contextintergenic
Nearest GenesLRFN3 (14253bp away)
ANODEV p-value1.1152260451e-05
FrequenciesBenign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
41828 chr19 36449786 36450495 wgEncodeRegDnaseClusteredV2 52 score:763, srow:577429
41828 chr19 36449891 36450556 wgEncodeRegTfbsClusteredV3 CTCF score:1000, expCount:73, expNums:2,16,18,20,24,37,42,44,49,174,213,262,267,290,463,493,595,597,598,601,603,604,605,606,607,609,621,627,628,629,630,631,635,636,638,639,640,641,642,644,645,646,647,648,650,651,652,653,654,655,656,658,661,662,663,665,667,668,669,671,672,674,676,677,678,679,682,683,684,685,686,687,689, expScores:261,112,210,109,146,220,201,171,154,276,628,134,149,601,208,241,1000,989,1000,496,780,1000,825,745,623,201,314,406,816,637,791,541,527,814,234,331,166,170,255,109,254,227,121,184,431,287,319,580,240,256,188,103,347,277,285,487,182,118,128,238,147,124,119,205,222,213,126,221,96,120,158,521,86, srow:2008968
41828 chr19 36450560 36450563 phastConsElements100way lod=14 score:255, srow:4261785
41828 chr19 36450071 36450740 wgEncodeRegTfbsClusteredV3 RBBP5 score:175, expCount:1, expNums:8, expScores:175, srow:2008976
41828 chr19 36450506 36450750 wgEncodeRegDnaseClusteredV2 4 score:256, srow:577430
41828 chr19 36450765 36450775 phastConsElements100way lod=16 score:268, srow:4261786
41828 chr19 36450559 36450802 wgEncodeRegTfbsClusteredV3 CTCF score:129, expCount:1, expNums:213, expScores:129, srow:2008977
41828 chr19 36451103 36451107 phastConsElements100way lod=13 score:247, srow:4261787
41828 chr19 36449872 36451135 cpgIsland CpG: 117 length:1264, cpgNum:117, gcNum:839, perCpg:18.5, perGc:66.4, obsExp:0.84, srow:13548
41828 chr19 36451141 36451148 phastConsElements100way lod=16 score:268, srow:4261788
41828 chr19 36450781 36451155 wgEncodeRegDnaseClusteredV2 4 score:330, srow:577431
41828 chr19 36449976 36451163 wgEncodeRegTfbsClusteredV3 SUZ12 score:219, expCount:2, expNums:358,578, expScores:91,174, srow:2008973
41828 chr19 36449520 36451188 wgEncodeRegTfbsClusteredV3 EZH2 score:336, expCount:3, expNums:21,40,43, expScores:336,245,275, srow:2008966
41828 chr19 36451136 36453135 cpgShore values(x.gr)[overs$srow, ]:24437
  • 14 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
41828 cellmeth_recounts PrEC: 28, LNCaP: 14, DU145: 35
41828 cellmeth_diffreps_PrECvsLNCaP A=26, B=3, Length=280, Event=Down, log2FC=-3.12, padj=0.000218204372296623
41828 tcgameth site:cg01519784, B=0.11, L=0.18, H=0.26
41828 tcgameth site:cg05312084, B=0.18, L=0.24, H=0.24
41828 tcgameth site:cg13179216, B=0.23, L=0.24, H=0.28
41828 tcgameth site:cg20546331, B=0.14, L=0.18, H=0.2