DMR Stats
Positionchr1:2398301-2398450 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesPLCH2 (9303bp away)
ANODEV p-value0.00789681801454
FrequenciesBenign: 0.0 (0.0%), Low: 3.0 (50.0%), High: 1.0 (11.11 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25 chr1 2396826 2398825 cpgShore values(x.gr)[overs$srow, ]:319
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
25 cellmeth_recounts PrEC: 15, LNCaP: 0, DU145: 0
25 cellmeth_diffreps_PrECvsLNCaP A=28, B=0, Length=400, Event=Down, log2FC=-Inf, padj=3.47401535442224e-08
25 cellmeth_diffreps_PrECvsDU145 A=28, B=0, Length=400, Event=Down, log2FC=-Inf, padj=4.7070673891257e-08
25 cellexp id=ENSG00000149527, name=PLCH2, PrEC=15605, str=15786, LNCaP=478, str=150, DU145=59, str=40
25 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
25 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305