DMR 2 chr1:724251-724400 (150bp)

DMR Stats
Positionchr1:724251-724400 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesLOC100288069 (10182bp away)
ANODEV p-value0.0213249567933
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields

Omics Overlaps

Dmrid Omic Set Data Plot
2 cellmeth_recounts PrEC: 73, LNCaP: 6, DU145: 72
2 cellmeth_diffreps_PrECvsLNCaP A=139, B=5, Length=700, Event=Down, log2FC=-4.8, padj=0
2 cellmeth_diffreps_PrECvsDU145 A=112, B=64, Length=260, Event=Down, log2FC=-0.81, padj=0.00894094149473954
2 cellmeth_diffreps_PrECvsDU145 A=28, B=76, Length=340, Event=Up, log2FC=1.44, padj=9.73147376535718e-05
2 cellmeth_diffreps_LNCaPvsDU145 A=35.28, B=712.79, Length=3100, Event=Up, log2FC=4.34, padj=0
2 cellexp id=ENSG00000237491, name=RP11-206L10.9, PrEC=9, str=28, LNCaP=108, str=71, DU145=17, str=19
2 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
2 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305