DMR Stats
Positionchr5:140011451-140011600 (View on UCSC)
Width150bp
Genomic Context3' end
Nearest GenesCD14 (0bp away)
ANODEV p-value0.000362738989127
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
38089 CD14 23185 uc003lgi.2 chr5 140011313 140013035 - 150 100.0 0.06 0 0.0 E1 (0), I1 (0), E2 (100) 100.0
38089 CD14 23185 uc003lgj.2 chr5 140011313 140013286 - 150 100.0 0.06 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (100) 100.0
38089 CD14 23185 uc021yej.1 chr5 140011313 140013286 - 150 100.0 0.08 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (100) 100.0
38089 CD14 23185 uc021yek.1 chr5 140011313 140013286 - 150 100.0 0.07 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (100) 100.0
38089 CD14 23185 uc021yel.1 chr5 140011443 140012573 - 150 100.0 0.07 0 0.0 E1 (100) 100.0
  • 5 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
38089 chr5 140009483 140011482 cpgShore values(x.gr)[overs$srow, ]:38215
38089 chr5 140011531 140011531 cosmic COSM1061721 srow:970168
38089 chr5 140011461 140011461 cosmic COSM1433639 srow:970166
38089 chr5 140011505 140011505 cosmic COSM292991 srow:970167
38089 chr5 140011549 140011549 cosmic COSM380193 srow:970169
38089 chr5 140011483 140012739 cpgIsland CpG: 96 length:1257, cpgNum:96, gcNum:787, perCpg:15.3, perGc:62.6, obsExp:0.78, srow:21129
38089 chr5 140011552 140012830 wgEncodeRegTfbsClusteredV3 EZH2 score:400, expCount:2, expNums:21,36, expScores:322,317, srow:3331606
38089 chr5 140011594 140011607 tfbsConsSites V$MEIS1AHOXA9_01 score:795, zScore:1.85, srow:4252912
38089 chr5 140011591 140011602 tfbsConsSites V$MEIS1_01 score:899, zScore:1.76, srow:4252911
38089 chr5 140011464 140011470 phastConsElements100way lod=23 score:304, srow:7314860
38089 chr5 140011580 140011584 phastConsElements100way lod=24 score:308, srow:7314861
  • 11 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
38089 cellmeth_recounts PrEC: 0, LNCaP: 1, DU145: 6
38089 cellexp id=ENSG00000170458, name=CD14, PrEC=67, str=53, LNCaP=5, str=3, DU145=82, str=21
38089 tcgaexp gene=CD14, entrez=929, pos=chr5:140011313-140013286(-), B=1646, L=1718, M=1490, H=1430
38089 pubmed gene=CD14, G=11192, GP=43, GC=1987, GM=30, GPM=1, GCM=6