DMR Stats | |
---|---|
Position | chr5:140011801-140012100 (View on UCSC) |
Width | 300bp |
Genomic Context | promoter |
Nearest Genes | CD14 (0bp away) |
ANODEV p-value | 7.39764043758e-07 |
Frequencies | Benign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 7.0 (77.78 %) |
Frequent? |
Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
38090 | CD14 | 23185 | uc003lgi.2 | chr5 | 140011313 | 140013035 | - | 300 | 100.0 | 0.09 | 0 | 0.0 | E1 (0), I1 (0), E2 (100) | 100.0 |
38090 | CD14 | 23185 | uc003lgj.2 | chr5 | 140011313 | 140013286 | - | 300 | 100.0 | 0.81 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (100) | 100.0 |
38090 | CD14 | 23185 | uc021yej.1 | chr5 | 140011313 | 140013286 | - | 300 | 100.0 | 0.21 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (100) | 100.0 |
38090 | CD14 | 23185 | uc021yek.1 | chr5 | 140011313 | 140013286 | - | 300 | 100.0 | 0.21 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (100) | 100.0 |
38090 | CD14 | 23185 | uc021yel.1 | chr5 | 140011443 | 140012573 | - | 300 | 100.0 | 0.21 | 0 | 9.0 | E1 (100) | 100.0 |
Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
---|---|---|---|---|---|---|
38090 | chr5 | 140011922 | 140011923 | phastConsElements100way | lod=14 | score:255, srow:7314886 |
38090 | chr5 | 140011808 | 140011809 | phastConsElements100way | lod=15 | score:262, srow:7314876 |
38090 | chr5 | 140011821 | 140011824 | phastConsElements100way | lod=15 | score:262, srow:7314877 |
38090 | chr5 | 140012044 | 140012046 | phastConsElements100way | lod=15 | score:262, srow:7314892 |
38090 | chr5 | 140011949 | 140011950 | phastConsElements100way | lod=16 | score:268, srow:7314888 |
38090 | chr5 | 140011990 | 140011992 | phastConsElements100way | lod=18 | score:280, srow:7314890 |
38090 | chr5 | 140011896 | 140011899 | phastConsElements100way | lod=19 | score:285, srow:7314883 |
38090 | chr5 | 140012087 | 140012091 | phastConsElements100way | lod=21 | score:295, srow:7314895 |
38090 | chr5 | 140011862 | 140011865 | phastConsElements100way | lod=22 | score:300, srow:7314879 |
38090 | chr5 | 140011917 | 140011920 | phastConsElements100way | lod=23 | score:304, srow:7314885 |
38090 | chr5 | 140012051 | 140012055 | phastConsElements100way | lod=23 | score:304, srow:7314893 |
38090 | chr5 | 140012008 | 140012012 | phastConsElements100way | lod=27 | score:320, srow:7314891 |
38090 | chr5 | 140011846 | 140011851 | phastConsElements100way | lod=35 | score:345, srow:7314878 |
38090 | chr5 | 140012060 | 140012078 | phastConsElements100way | lod=47 | score:375, srow:7314894 |
38090 | chr5 | 140011904 | 140011912 | phastConsElements100way | lod=49 | score:379, srow:7314884 |
38090 | chr5 | 140011955 | 140011983 | phastConsElements100way | lod=78 | score:425, srow:7314889 |
Dmrid | Omic Set | Data | Plot |
---|---|---|---|
38090 | cellmeth_recounts | PrEC: 0, LNCaP: 24, DU145: 18 | |
38090 | cellmeth_diffreps_PrECvsLNCaP | A=0, B=21, Length=380, Event=Up, log2FC=Inf, padj=4.02459409075954e-06 | |
38090 | cellmeth_diffreps_PrECvsLNCaP | A=0, B=38, Length=600, Event=Up, log2FC=Inf, padj=3.80001230326287e-11 | |
38090 | cellexp | id=ENSG00000170458, name=CD14, PrEC=67, str=53, LNCaP=5, str=3, DU145=82, str=21 | |
38090 | tcgameth | site:cg02343503, B=0.1, L=0.12, H=0.21 | |
38090 | tcgaexp | gene=CD14, entrez=929, pos=chr5:140011313-140013286(-), B=1646, L=1718, M=1490, H=1430 | |
38090 | pubmed | gene=CD14, G=11192, GP=43, GC=1987, GM=30, GPM=1, GCM=6 |