DMR 10039 chrY:6173751-6173900 (150bp)

DMR Stats
PositionchrY:6173751-6173900 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesTSPY2 (56697bp away)
ANODEV p-value0.0122142020187
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 4.0 (44.44 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
10039 chrY 6173547 6173839 cpgIsland CpG: 25 length:293, cpgNum:25, gcNum:185, perCpg:17.1, perGc:63.1, obsExp:0.86, srow:28603
10039 chrY 6173840 6175839 cpgShore — values(x.gr)[overs$srow, ]:51755
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
10039 cellmeth_recounts PrEC: 7, LNCaP: 0, DU145: 1
10039 cellmeth_diffreps_PrECvsLNCaP A=11, B=0, Length=280, Event=Down, log2FC=-Inf, padj=0.00296620769710024
10039 tcgaexp gene=TTTY23, entrez=252955, pos=chrY:6110487-9749571(-), B=0, L=0, M=0, H=0