DMR 10040 chrY:6400951-6401450 (500bp)

DMR Stats
PositionchrY:6400951-6401450 (View on UCSC)
Width500bp
Genomic Contextintergenic
Nearest GenesTTTY8 (59279bp away)
ANODEV p-value0.00848048688703
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
10040 chrY 6400779 6401320 phastConsElements100way lod=158 score:495, srow:10098487
10040 chrY 6401343 6401456 phastConsElements100way lod=49 score:379, srow:10098488
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
10040 cellmeth_recounts PrEC: 16, LNCaP: 9, DU145: 59
10040 cellmeth_diffreps_LNCaPvsDU145 A=4.28, B=31.8, Length=280, Event=Up, log2FC=2.89, padj=0.00021365491305292
10040 tcgaexp gene=TTTY2, entrez=60439, pos=chrY:6274285-9596085(-), B=0, L=0, M=0, H=0
10040 tcgaexp gene=TTTY8, entrez=84673, pos=chrY:6339072-9531308(-), B=0, L=0, M=0, H=0
10040 tcgaexp gene=TTTY7, entrez=246122, pos=chrY:6317509-9552871(+), B=0, L=0, M=0, H=0
10040 tcgaexp gene=TTTY21, entrez=252953, pos=chrY:6311475-9558905(+), B=0, L=0, M=0, H=0
10040 tcgaexp gene=TTTY23, entrez=252955, pos=chrY:6110487-9749571(-), B=0, L=0, M=0, H=0
10040 tcgaexp gene=TTTY1B, entrez=100101116, pos=chrY:6258442-9611928(+), B=0, L=0, M=0, H=0