DMR 10041 chrY:6401851-6402200 (350bp)

DMR Stats
PositionchrY:6401851-6402200 (View on UCSC)
Width350bp
Genomic Contextintergenic
Nearest GenesTTTY8 (60179bp away)
ANODEV p-value0.0128184217314
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
10041 chrY 6401817 6401861 phastConsElements100way lod=37 score:351, srow:10098492
10041 chrY 6401881 6401932 phastConsElements100way lod=18 score:280, srow:10098493
10041 chrY 6401965 6402004 phastConsElements100way lod=28 score:323, srow:10098494
10041 chrY 6402073 6402078 phastConsElements100way lod=13 score:247, srow:10098495
10041 chrY 6402132 6402154 phastConsElements100way lod=17 score:274, srow:10098496
10041 chrY 6402187 6402265 phastConsElements100way lod=26 score:316, srow:10098497
  • 6 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
10041 cellmeth_recounts PrEC: 20, LNCaP: 0, DU145: 108
10041 cellmeth_diffreps_PrECvsLNCaP A=58, B=2, Length=780, Event=Down, log2FC=-4.86, padj=6.57551416562261e-14
10041 cellmeth_diffreps_PrECvsDU145 A=14, B=50, Length=280, Event=Up, log2FC=1.84, padj=0.000202070817086531
10041 cellmeth_diffreps_PrECvsDU145 A=9, B=38, Length=220, Event=Up, log2FC=2.08, padj=0.000548761861871564
10041 cellmeth_diffreps_LNCaPvsDU145 A=23.52, B=283.43, Length=2160, Event=Up, log2FC=3.59, padj=0
10041 tcgaexp gene=TTTY2, entrez=60439, pos=chrY:6274285-9596085(-), B=0, L=0, M=0, H=0
10041 tcgaexp gene=TTTY8, entrez=84673, pos=chrY:6339072-9531308(-), B=0, L=0, M=0, H=0
10041 tcgaexp gene=TTTY7, entrez=246122, pos=chrY:6317509-9552871(+), B=0, L=0, M=0, H=0
10041 tcgaexp gene=TTTY21, entrez=252953, pos=chrY:6311475-9558905(+), B=0, L=0, M=0, H=0
10041 tcgaexp gene=TTTY23, entrez=252955, pos=chrY:6110487-9749571(-), B=0, L=0, M=0, H=0
10041 tcgaexp gene=TTTY1B, entrez=100101116, pos=chrY:6258442-9611928(+), B=0, L=0, M=0, H=0