DMR 10045 chrY:7235351-7235550 (200bp)

DMR Stats
PositionchrY:7235351-7235550 (View on UCSC)
Width200bp
Genomic Contextexon
Nearest GenesPRKY (0bp away)
ANODEV p-value0.00197986463111
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
10045 PRKY 31720 uc004fre.3 chrY 7142013 7249588 + 200 100.0 0.21 1 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (23), E6 (39), I6 (38.5), E7 (0), I7 (0), E8 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
10045 chrY 7235401 7235401 cosmic COSM139263 srow:1286992
10045 chrY 7235378 7235437 phastConsElements100way lod=264 score:545, srow:10099169
10045 chrY 7235439 7235458 phastConsElements100way lod=119 score:467, srow:10099170
10045 chrY 7235460 7235476 phastConsElements100way lod=103 score:452, srow:10099171
  • 4 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
10045 cellmeth_recounts PrEC: 1, LNCaP: 0, DU145: 0
10045 cellexp id=ENSG00000099725, name=PRKY, PrEC=990, str=2952, LNCaP=738, str=494, DU145=341, str=486
10045 tcgaexp gene=PRKY, entrez=5616, pos=chrY:7142013-7249588(+), B=462, L=378, M=300, H=320
10045 tcgaexp gene=TTTY2, entrez=60439, pos=chrY:6274285-9596085(-), B=0, L=0, M=0, H=0
10045 tcgaexp gene=TTTY8, entrez=84673, pos=chrY:6339072-9531308(-), B=0, L=0, M=0, H=0
10045 tcgaexp gene=TTTY7, entrez=246122, pos=chrY:6317509-9552871(+), B=0, L=0, M=0, H=0
10045 tcgaexp gene=TTTY21, entrez=252953, pos=chrY:6311475-9558905(+), B=0, L=0, M=0, H=0
10045 tcgaexp gene=TTTY23, entrez=252955, pos=chrY:6110487-9749571(-), B=0, L=0, M=0, H=0
10045 tcgaexp gene=TTTY1B, entrez=100101116, pos=chrY:6258442-9611928(+), B=0, L=0, M=0, H=0