DMR 10054 chrY:13462001-13462200 (200bp)

DMR Stats
PositionchrY:13462001-13462200 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesDQ590126 (127382bp away)
ANODEV p-value0.00754679093928
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
10054 chrY 13461761 13462235 wgEncodeRegDnaseClusteredV2 66 score:1000, srow:1281316
10054 chrY 13460592 13462591 cpgShore — values(x.gr)[overs$srow, ]:51814
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
10054 cellmeth_recounts PrEC: 70, LNCaP: 3, DU145: 59
10054 cellmeth_diffreps_PrECvsLNCaP A=1148, B=23, Length=2420, Event=Down, log2FC=-5.64, padj=0
10054 cellmeth_diffreps_PrECvsDU145 A=128, B=47, Length=400, Event=Down, log2FC=-1.45, padj=4.41730141604235e-08
10054 cellmeth_diffreps_LNCaPvsDU145 A=4.28, B=55.19, Length=580, Event=Up, log2FC=3.69, padj=2.71733586098247e-10