DMR 10055 chrY:13469701-13469850 (150bp)

DMR Stats
PositionchrY:13469701-13469850 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesDQ590126 (135082bp away)
ANODEV p-value0.016090396989
FrequenciesBenign: 6.0 (85.71%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
10055 chrY 13469681 13470275 wgEncodeRegDnaseClusteredV2 68 score:1000, srow:1281322
10055 chrY 13468632 13470631 cpgShore — values(x.gr)[overs$srow, ]:51816
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
10055 cellmeth_recounts PrEC: 25, LNCaP: 0, DU145: 35
10055 cellmeth_diffreps_PrECvsLNCaP A=1883, B=49, Length=3040, Event=Down, log2FC=-5.26, padj=0
10055 cellmeth_diffreps_PrECvsDU145 A=607, B=177, Length=480, Event=Down, log2FC=-1.78, padj=0
10055 cellmeth_diffreps_LNCaPvsDU145 A=34.21, B=379.78, Length=1520, Event=Up, log2FC=3.47, padj=0