DMR 10057 chrY:13487351-13487500 (150bp)

DMR Stats
PositionchrY:13487351-13487500 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesIGL@ (142136bp away)
ANODEV p-value0.00411014727376
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
10057 chrY 13487161 13487435 wgEncodeRegDnaseClusteredV2 55 score:1000, srow:1281329
10057 chrY 13486005 13488004 cpgShore — values(x.gr)[overs$srow, ]:51820
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
10057 cellmeth_recounts PrEC: 53, LNCaP: 4, DU145: 12
10057 cellmeth_diffreps_PrECvsLNCaP A=98, B=3, Length=580, Event=Down, log2FC=-5.03, padj=0
10057 cellmeth_diffreps_PrECvsDU145 A=92, B=15, Length=420, Event=Down, log2FC=-2.62, padj=6.44702440888334e-13