DMR 10060 chrY:14099901-14100100 (200bp)

DMR Stats
PositionchrY:14099901-14100100 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesGYG2P1 (417814bp away)
ANODEV p-value0.00409893526629
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
10060 chrY 14099902 14099903 phastConsElements100way lod=27 score:320, srow:10103545
10060 chrY 14099906 14099924 phastConsElements100way lod=41 score:361, srow:10103546
10060 chrY 14099935 14099939 phastConsElements100way lod=23 score:304, srow:10103547
10060 chrY 14099945 14099963 phastConsElements100way lod=77 score:423, srow:10103548
10060 chrY 14099965 14099966 phastConsElements100way lod=23 score:304, srow:10103549
10060 chrY 14099968 14099969 phastConsElements100way lod=16 score:268, srow:10103550
10060 chrY 14099974 14099984 phastConsElements100way lod=43 score:366, srow:10103551
10060 chrY 14099995 14100029 phastConsElements100way lod=260 score:544, srow:10103552
10060 chrY 14100031 14100032 phastConsElements100way lod=29 score:327, srow:10103553
10060 chrY 14100034 14100035 phastConsElements100way lod=36 score:348, srow:10103554
10060 chrY 14100037 14100038 phastConsElements100way lod=19 score:285, srow:10103555
10060 chrY 14100040 14100059 phastConsElements100way lod=92 score:441, srow:10103556
10060 chrY 14100061 14100068 phastConsElements100way lod=50 score:381, srow:10103557
10060 chrY 14100070 14100071 phastConsElements100way lod=20 score:290, srow:10103558
10060 chrY 14100074 14100077 phastConsElements100way lod=29 score:327, srow:10103559
10060 chrY 14100079 14100080 phastConsElements100way lod=19 score:285, srow:10103560
10060 chrY 14100085 14100089 phastConsElements100way lod=36 score:348, srow:10103561
10060 chrY 14100091 14100095 phastConsElements100way lod=41 score:361, srow:10103562
10060 chrY 14100003 14100593 cpgIsland CpG: 63 length:591, cpgNum:63, gcNum:385, perCpg:21.3, perGc:65.1, obsExp:1.01, srow:28649
10060 chrY 14098003 14100002 cpgShore — values(x.gr)[overs$srow, ]:51830
  • 20 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
10060 cellmeth_recounts PrEC: 27, LNCaP: 0, DU145: 3
10060 cellmeth_diffreps_PrECvsLNCaP A=230, B=14, Length=880, Event=Down, log2FC=-4.04, padj=0
10060 cellmeth_diffreps_PrECvsDU145 A=230, B=9, Length=880, Event=Down, log2FC=-4.68, padj=0
10060 cellexp id=ENSG00000235649, name=MXRA5P1, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0