DMR 10392 chr1:25055451-25055600 (150bp)

DMR Stats
Positionchr1:25055451-25055600 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesCLIC4 (16159bp away)
ANODEV p-value0.00788163962326
FrequenciesBenign: 5.0 (71.43%), Low: 1.0 (16.67%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
10392 chr1 25055486 25055770 wgEncodeRegDnaseClusteredV2 2 score:255, srow:20090
10392 chr1 25055559 25055878 wgEncodeRegTfbsClusteredV3 STAT3 score:354, expCount:4, expNums:566,567,568,569, expScores:354,179,177,321, srow:67482
10392 chr1 25055575 25055584 tfbsConsSites V$HSF1_01 score:895, zScore:1.92, srow:52681
10392 chr1 25055575 25055584 tfbsConsSites V$HSF2_01 score:917, zScore:1.73, srow:52682
  • 4 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
10392 cellmeth_recounts PrEC: 15, LNCaP: 0, DU145: 6
10392 cellmeth_diffreps_PrECvsLNCaP A=23, B=1, Length=380, Event=Down, log2FC=-4.52, padj=3.04238490738774e-05
10392 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305