DMR 10441 chr1:28889851-28890000 (150bp)

DMR Stats
Positionchr1:28889851-28890000 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesTRNAU1AP (0bp away)
ANODEV p-value0.00860478412513
FrequenciesBenign: 5.0 (71.43%), Low: 2.0 (33.33%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
10441 TRNAU1AP 537 uc001bqh.4 chr1 28879529 28905057 + 150 100.0 0.12 1 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (100), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0) 0.0
10441 TRNAU1AP 537 uc001bqi.3 chr1 28879529 28905057 + 150 100.0 0.12 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields

Omics Overlaps

Dmrid Omic Set Data Plot
10441 cellmeth_recounts PrEC: 5, LNCaP: 10, DU145: 8
10441 cellexp id=ENSG00000180098, name=TRNAU1AP, PrEC=1131, str=1317, LNCaP=1155, str=1406, DU145=1228, str=1654
10441 tcgaexp gene=TRNAU1AP, entrez=54952, pos=chr1:28879529-28905057(+), B=638, L=580, M=565, H=569
10441 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305