DMR 105 chr1:10686951-10687100 (150bp)

DMR Stats
Positionchr1:10686951-10687100 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesPEX14 (0bp away)
ANODEV p-value0.0470547021962
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
105 PEX14 199 uc001arn.3 chr1 10535003 10690815 + 150 100.0 0.36 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (100), E8 (0), I8 (0), E9 (0) 0.0
105 PEX14 199 uc009vmv.3 chr1 10535003 10690815 + 150 100.0 0.21 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (100), E8 (0), I8 (0), E9 (0) 0.0
105 PEX14 199 uc009vmw.3 chr1 10588312 10690815 + 150 100.0 0.21 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (100), E7 (0), I7 (0), E8 (0) 0.0
105 PEX14 199 uc010oam.2 chr1 10535003 10690815 + 150 100.0 0.21 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (100), E7 (0), I7 (0), E8 (0) 0.0
105 PEX14 199 uc010oan.2 chr1 10535003 10690815 + 150 100.0 0.21 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (100), E7 (0), I7 (0), E8 (0) 0.0
  • 5 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
105 chr1 10687021 10687390 wgEncodeRegDnaseClusteredV2 4 score:442, srow:8592
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
105 cellmeth_recounts PrEC: 103, LNCaP: 14, DU145: 4
105 cellmeth_diffreps_PrECvsLNCaP A=196, B=17, Length=680, Event=Down, log2FC=-3.53, padj=0
105 cellmeth_diffreps_PrECvsDU145 A=196, B=6, Length=680, Event=Down, log2FC=-5.03, padj=0
105 cellexp id=ENSG00000142655, name=PEX14, PrEC=2040, str=2504, LNCaP=1455, str=1052, DU145=1343, str=1366
105 tcgaexp gene=PEX14, entrez=5195, pos=chr1:10535003-10690815(+), B=2169, L=1677, M=1496, H=1299
105 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
105 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305