DMR 10558 chr1:44435001-44435200 (200bp)

DMR Stats
Positionchr1:44435001-44435200 (View on UCSC)
Width200bp
Genomic Contextpromoter
Nearest GenesDPH2 (452bp away)
ANODEV p-value0.019254969798
FrequenciesBenign: 6.0 (85.71%), Low: 2.0 (33.33%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
10558 chr1 44433410 44435409 cpgShore — values(x.gr)[overs$srow, ]:1844
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
10558 cellmeth_recounts PrEC: 17, LNCaP: 6, DU145: 4
10558 cellmeth_diffreps_PrECvsLNCaP A=26, B=5, Length=320, Event=Down, log2FC=-2.38, padj=0.00263389182989827
10558 cellmeth_diffreps_PrECvsDU145 A=26, B=3, Length=340, Event=Down, log2FC=-3.12, padj=0.00026623438066776
10558 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305