DMR 10562 chr1:44869901-44870050 (150bp)

DMR Stats
Positionchr1:44869901-44870050 (View on UCSC)
Width150bp
Genomic Contextpromoter
Nearest GenesRNF220 (909bp away)
ANODEV p-value0.00389009097715
FrequenciesBenign: 5.0 (71.43%), Low: 2.0 (33.33%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
10562 chr1 44869993 44870005 phastConsElements100way lod=13 score:247, srow:196447
10562 chr1 44870015 44870047 phastConsElements100way lod=60 score:399, srow:196448
10562 chr1 44869110 44871109 cpgShore — values(x.gr)[overs$srow, ]:1859
  • 3 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
10562 cellmeth_recounts PrEC: 9, LNCaP: 19, DU145: 5
10562 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305