DMR 109 chr1:11512851-11513000 (150bp)

DMR Stats
Positionchr1:11512851-11513000 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesPTCHD2 (26294bp away)
ANODEV p-value0.00502880488729
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
109 chr1 11512746 11512955 wgEncodeRegDnaseClusteredV2 2 score:456, srow:9388
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
109 cellmeth_recounts PrEC: 33, LNCaP: 0, DU145: 0
109 cellmeth_diffreps_PrECvsLNCaP A=50, B=1, Length=420, Event=Down, log2FC=-5.64, padj=6.8513650037902e-13
109 cellmeth_diffreps_PrECvsDU145 A=50, B=0, Length=420, Event=Down, log2FC=-Inf, padj=1.86950950050002e-14
109 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
109 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305