DMR 10963 chr1:172628451-172628600 (150bp)

DMR Stats
Positionchr1:172628451-172628600 (View on UCSC)
Width150bp
Genomic Contextpromoter
Nearest GenesFASLG (0bp away)
ANODEV p-value0.0497802953216
FrequenciesBenign: 5.0 (71.43%), Low: 0.0 (0.0%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
10963 FASLG 2160 uc001gis.3 chr1 172628185 172636012 + 150 100.0 0.54 0 100.0 E1 (100), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0) 0.0
10963 FASLG 2160 uc001git.3 chr1 172628185 172636012 + 150 100.0 0.73 0 100.0 E1 (100), I1 (0), E2 (0), I2 (0), E3 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
10963 chr1 172627986 172628510 wgEncodeRegDnaseClusteredV2 18 score:660, srow:82096
10963 chr1 172628454 172628473 tfbsConsSites V$PPARA_01 score:771, zScore:2.37, srow:356709
10963 chr1 172628498 172628504 tfbsConsSites V$EN1_01 score:1000, zScore:2.33, srow:356710
10963 chr1 172628481 172628481 cosmic COSM320325 srow:86611
10963 chr1 172628516 172628516 cosmic COSM400900 srow:86612
10963 chr1 172628518 172628518 cosmic COSM1295494 srow:86613
10963 chr1 172628521 172628521 cosmic COSM899686 srow:86614
10963 chr1 172628540 172628540 cosmic COSM530494 srow:86615
10963 chr1 172628574 172628574 cosmic COSM899687 srow:86616
10963 chr1 172628583 172628583 cosmic COSM899688 srow:86617
10963 chr1 172628584 172628584 cosmic COSM1499700 srow:86618
10963 chr1 172628442 172628451 phastConsElements100way lod=13 score:247, srow:618156
10963 chr1 172628456 172628460 phastConsElements100way lod=21 score:295, srow:618157
10963 chr1 172628468 172628475 phastConsElements100way lod=23 score:304, srow:618158
10963 chr1 172628555 172628561 phastConsElements100way lod=33 score:340, srow:618159
10963 chr1 172628588 172628592 phastConsElements100way lod=16 score:268, srow:618160
10963 chr1 172628595 172628610 phastConsElements100way lod=58 score:395, srow:618161
  • 17 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
10963 cellmeth_recounts PrEC: 3, LNCaP: 3, DU145: 1
10963 cellexp id=ENSG00000117560, name=FASLG, PrEC=1, str=0, LNCaP=0, str=0, DU145=0, str=0
10963 tcgaexp gene=FASLG, entrez=356, pos=chr1:172628185-172636012(+), B=19, L=16, M=18, H=22
10963 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305